Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs62052244 chr16:90034117 A/G 3.28E-5 280 25.6 37.6 10.23 KM Plot
KIRP rs62052249 chr16:90044191 G/C 0.000185 286 24.67 42.52 10.23 KM Plot
KIRP rs62054571 chr16:90063901 A/C 0.000174 286 25.15 35.32 10.47 KM Plot
KIRP rs62054572 chr16:90065941 G/C 0.000174 286 25.15 35.32 10.47 KM Plot
KIRP rs62054580 chr16:90079569 G/C 1.16E-7 285 24.73 34.48 10.7 KM Plot
KIRP rs62054583 chr16:90084370 T/C 1.52E-7 284 24.67 34.48 10.7 KM Plot
KIRP rs62054613 chr16:90091929 G/A 1.86E-7 285 24.13 34.63 10.7 KM Plot
KIRP rs62054624 chr16:90103451 C/T 1.63E-7 287 24.73 38.05 10.7 KM Plot
KIRP rs62054656 chr16:90136621 C/A 2.6E-5 278 25.7 26.85 13.17 KM Plot
KIRP rs62054657 chr16:90140324 G/A 2.6E-5 278 25.7 26.85 13.17 KM Plot
KIRP rs62067238 chr17:78505398 G/A 8.27E-5 281 26.18 23.1 17.13 KM Plot
KIRP rs62076531 chr17:78339835 T/A 1.84E-8 282 24.8 30.12 9.77 KM Plot
KIRP rs62077766 chr17:78355951 G/A 1.68E-8 283 24.67 39.8 9.77 KM Plot
KIRP rs62077768 chr17:78359309 C/T 2.57E-8 280 23.6 31.48 9.77 KM Plot
KIRP rs62077770 chr17:78361424 G/C 1.49E-8 284 24.67 38.4 9.77 KM Plot